| 09/09/06 | hosting | Dickinson | 31-28 |
| 09/16/06 | at | William Paterson | 31-27 |
| 09/23/06 | at | RPI | 24-17 |
| 09/30/06 | hosting | WPI | 19-14 |
| 10/14/06 | at | Merchant Marine | 30-19 |
| 10/21/06 | at | St Lawrence | 27-7 |
| 10/28/06 | at | Alfred | 21-14 |
| 11/04/06 | hosting | Union NY | 14-31 |
| 11/11/06 | hosting | Rochester | 31-21 |
| 11/18/06 | at | Rowan | 18-20 |