| 09/02/06 | at | St John's MN | 11-15 |
| 09/09/06 | hosting | Black Hills St | 20-0 |
| 09/16/06 | at | Alma | 30-33 |
| 09/30/06 | hosting | UW-Whitewater | 0-34 |
| 10/07/06 | hosting | UW-River Falls | 23-3 |
| 10/14/06 | at | UW-Stout | 6-14 |
| 10/21/06 | at | UW-La Crosse | 14-42 |
| 10/28/06 | hosting | UW-Stevens Point | 17-20 |
| 11/04/06 | hosting | UW-Oshkosh | 21-25 |
| 11/11/06 | at | UW-Platteville | 21-7 |