| 09/02/06 | at | VMI | 19-20 |
| 09/09/06 | hosting | Wingate | 16-22 |
| 09/16/06 | at | Lenoir-Rhyne | 24-14 |
| 09/30/06 | hosting | San Diego | 21-50 |
| 10/07/06 | hosting | Jacksonville FL | 38-3 |
| 10/14/06 | at | Morehead St | 27-24 |
| 10/21/06 | hosting | Dayton | 37-36 |
| 10/28/06 | at | Valparaiso | 48-14 |
| 11/04/06 | at | Drake | 15-35 |
| 11/11/06 | hosting | Butler | 50-10 |