| 09/02/06 | at | Benedict | 7-21 |
| 09/09/06 | at | Bethune-Cookman | 6-55 |
| 09/23/06 | hosting | Liberty | 0-28 |
| 09/30/06 | hosting | Miles | 12-24 |
| 10/07/06 | hosting | Charleston Southern | 13-38 |
| 10/14/06 | at | Morehouse | 24-20 |
| 10/21/06 | hosting | Winston-Salem St | 6-38 |
| 10/28/06 | at | Johnson C. Smith | 6-27 |
| 11/04/06 | at | Coastal Carolina | 6-66 |
| 11/11/06 | hosting | Edward Waters | 28-7 |
| 11/18/06 | at | Cal Poly SLO | 0-55 |