| 09/02/06 | hosting | Fort Lewis | 44-0 |
| 09/09/06 | at | Weber St | 17-0 |
| 09/16/06 | at | Sacramento St | 17-10 |
| 09/23/06 | at | San José St | 7-17 |
| 09/30/06 | hosting | Southern Utah | 18-14 |
| 10/07/06 | hosting | UC-Davis | 23-17 |
| 10/21/06 | hosting | South Dakota St | 28-29 |
| 10/28/06 | at | San Diego St | 16-14 |
| 11/04/06 | at | Montana | 9-10 |
| 11/11/06 | at | North Dakota St | 14-51 |
| 11/18/06 | hosting | Savannah St | 55-0 |