| 08/31/06 | hosting | Minnesota-Crookston | 71-0 |
| 09/09/06 | at | Missouri Western | 14-27 |
| 09/16/06 | hosting | Mary | 37-14 |
| 09/23/06 | hosting | South Dakota | 10-20 |
| 09/30/06 | at | Central Washington | 14-24 |
| 10/07/06 | hosting | Western Washington | 17-24 |
| 10/14/06 | at | Augustana SD | 23-27 |
| 10/21/06 | hosting | Minn St-Mankato | 16-3 |
| 10/28/06 | at | Nebraska-Omaha | 17-21 |
| 11/04/06 | hosting | North Dakota | 27-34 |
| 11/11/06 | at | Minnesota-Duluth | 24-29 |