| 09/02/06 | at | Johns Hopkins | 20-10 |
| 09/09/06 | hosting | St John Fisher | 10-30 |
| 09/16/06 | hosting | Gettysburg | 54-42 |
| 09/23/06 | at | Union NY | 24-27 |
| 09/30/06 | hosting | St Lawrence | 19-18 |
| 10/07/06 | hosting | Merchant Marine | 28-24 |
| 10/21/06 | at | WPI | 34-7 |
| 10/28/06 | at | Grove City | 38-21 |
| 11/04/06 | hosting | RPI | 30-23 |
| 11/11/06 | at | Hobart | 21-31 |
| 11/18/06 | at | Alfred | 34-40 |