| 09/02/06 | at | Bacone | 26-13 |
| 09/09/06 | hosting | NW Oklahoma St | 34-10 |
| 09/16/06 | hosting | Western St CO | 9-14 |
| 09/23/06 | at | Adams St | 17-34 |
| 09/30/06 | hosting | Chadron St | 20-40 |
| 10/07/06 | at | Colorado Mines | 19-16 |
| 10/14/06 | at | Paul Quinn | 24-0 |
| 10/21/06 | hosting | Western New Mexico | 27-22 |
| 10/28/06 | at | Fort Lewis | 28-25 |
| 11/04/06 | hosting | Nebraska-Kearney | 7-17 |
| 11/11/06 | at | Mesa St | 7-19 |