| 08/26/06 | at | Western New Mexico | 23-7 |
| 09/02/06 | at | Cal Poly SLO | 0-44 |
| 09/09/06 | at | Idaho St | 12-48 |
| 09/16/06 | hosting | Nebraska-Kearney | 21-16 |
| 09/23/06 | at | Mesa St | 35-20 |
| 09/30/06 | hosting | Western St CO | 35-14 |
| 10/07/06 | at | Adams St | 17-14 |
| 10/14/06 | hosting | Chadron St | 27-40 |
| 10/21/06 | at | Colorado Mines | 41-34 |
| 10/28/06 | hosting | New Mexico Highlands | 25-28 |
| 12/02/06 | at | Dixie St | 24-14 |