| 09/02/06 | at | Nebraska-Omaha | 19-29 |
| 09/09/06 | hosting | Wayne St NE | 23-14 |
| 09/16/06 | at | Fort Lewis | 16-21 |
| 09/30/06 | hosting | Mesa St | 27-0 |
| 10/07/06 | at | Western St CO | 23-3 |
| 10/14/06 | hosting | Adams St | 31-7 |
| 10/21/06 | at | Chadron St | 12-31 |
| 10/28/06 | hosting | Colorado Mines | 14-20 |
| 11/04/06 | at | New Mexico Highlands | 17-7 |
| 11/11/06 | hosting | Western New Mexico | 20-13 |