| 09/02/06 | hosting | UC-Davis | 7-38 |
| 09/09/06 | at | Portland St | 3-45 |
| 09/16/06 | at | Texas St-San Marcos | 14-13 |
| 09/23/06 | hosting | Western Illinois | 28-42 |
| 09/28/06 | at | Weber St | 21-26 |
| 10/07/06 | hosting | Idaho St | 13-41 |
| 10/14/06 | hosting | Eastern Washington | 0-34 |
| 10/28/06 | at | Sacramento St | 9-14 |
| 11/04/06 | at | Montana St | 10-13 |
| 11/11/06 | hosting | Montana | 21-53 |
| 11/18/06 | hosting | Northern Arizona | 3-54 |