| 08/31/06 | at | North Dakota St | 7-66 |
| 09/09/06 | hosting | Augustana SD | 16-35 |
| 09/16/06 | hosting | Northern St SD | 28-20 |
| 09/23/06 | at | Mary | 22-19 |
| 09/30/06 | hosting | Winona St | 17-24 |
| 10/07/06 | hosting | SW Minnesota St | 21-23 |
| 10/14/06 | at | Minn St-Moorhead | 18-20 |
| 10/21/06 | at | Upper Iowa | 41-14 |
| 10/28/06 | at | Wayne St NE | 27-24 |
| 11/04/06 | hosting | Bemidji St | 7-27 |
| 11/10/06 | hosting | Minnesota-Crookston | 49-0 |