| 08/31/06 | hosting | Upper Iowa | 14-24 |
| 09/09/06 | at | Nebraska-Kearney | 14-23 |
| 09/16/06 | hosting | Chadron St | 14-38 |
| 09/23/06 | at | Minn St-Moorhead | 24-21 |
| 09/30/06 | at | Minnesota-Crookston | 28-0 |
| 10/07/06 | hosting | Northern St SD | 7-0 |
| 10/14/06 | hosting | Bemidji St | 37-40 |
| 10/21/06 | at | SW Minnesota St | 27-24 |
| 10/28/06 | hosting | Concordia-St Paul | 24-27 |
| 11/04/06 | hosting | Missouri-Rolla | 14-9 |
| 11/11/06 | at | Winona St | 3-31 |