| 08/31/06 | at | Wayne St NE | 24-14 |
| 09/09/06 | at | Drake | 7-40 |
| 09/16/06 | hosting | UW-Stout | 34-36 |
| 09/23/06 | at | Winona St | 7-48 |
| 09/30/06 | hosting | Minn St-Moorhead | 36-13 |
| 10/07/06 | hosting | Minnesota-Crookston | 56-7 |
| 10/14/06 | at | SW Minnesota St | 17-20 |
| 10/21/06 | hosting | Concordia-St Paul | 14-41 |
| 10/28/06 | at | Mary | 13-42 |
| 11/04/06 | hosting | Northern St SD | 20-26 |
| 11/10/06 | hosting | Bemidji St | 20-44 |