| 09/02/06 | hosting | Hampton | 26-27 |
| 09/09/06 | at | Alabama A&M | 27-30 |
| 09/16/06 | at | Houston | 22-42 |
| 09/30/06 | hosting | Prairie View A&M | 53-7 |
| 10/07/06 | at | Mississippi Valley St | 28-25 |
| 10/14/06 | at | Arkansas-Pine Bluff | 28-33 |
| 10/21/06 | hosting | Jackson St | 36-7 |
| 10/28/06 | at | Texas Southern | 28-33 |
| 11/04/06 | hosting | Alabama St | 16-35 |
| 11/25/06 | at | Southern U. | 17-21 |
| 12/02/06 | hosting | Alcorn St | 14-21 |