| 09/02/06 | hosting | Prairie View A&M | 17-14 |
| 09/09/06 | at | Alabama St | 10-9 |
| 09/16/06 | at | New Mexico St | 14-48 |
| 09/23/06 | hosting | Alabama A&M | 14-19 |
| 09/30/06 | hosting | Jackson St | 5-29 |
| 10/14/06 | at | Alcorn St | 23-44 |
| 10/21/06 | hosting | Mississippi Valley St | 18-20 |
| 10/28/06 | hosting | Grambling St | 33-28 |
| 11/04/06 | at | Southern U. | 17-34 |
| 11/11/06 | at | Texas St-San Marcos | 21-41 |
| 11/18/06 | at | Arkansas-Pine Bluff | 31-42 |