| 09/02/06 | at | Ohio U. | 3-29 |
| 09/07/06 | hosting | Urbana | 28-0 |
| 09/16/06 | hosting | Gardner-Webb | 35-9 |
| 09/23/06 | hosting | Jacksonville St | 24-14 |
| 09/30/06 | at | Austin Peay | 20-10 |
| 10/05/06 | at | Tennessee Tech | 35-16 |
| 10/21/06 | at | Samford | 10-6 |
| 10/28/06 | hosting | Eastern Illinois | 15-9 |
| 11/04/06 | at | SE Missouri St | 28-14 |
| 11/11/06 | hosting | Eastern Kentucky | 28-31 |
| 11/18/06 | at | Murray St | 42-14 |
| 11/25/06 | at | Southern Illinois | 30-36 |